Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter, hae1/hme family, permease protein | BACPLE_01056 | Not Available | Negative | 1203903 - 1207019 | 116093.0 |
| efflux transporter, rnd family, mfp subunit | BACPLE_01057 | Not Available | Negative | 1207029 - 1208063 | 37157.7 |
| transcriptional regulator, arac family | BACPLE_01058 | Not Available | Positive | 1208239 - 1209120 | 34169.4 |
| glycerate kinase | BACPLE_01059 | Not Available | Positive | 1209210 - 1210283 | 38146.6 |
| hypothetical protein | BACPLE_01060 | Not Available | Positive | 1210413 - 1211459 | 40250.2 |
| histidine triad domain protein | BACPLE_01061 | Not Available | Negative | 1211535 - 1212443 | 34841.4 |
| hypothetical protein | BACPLE_01062 | Not Available | Negative | 1212449 - 1213519 | 42371.1 |
| crispr-associated protein cas2 | BACPLE_01063 | Not Available | Negative | 1214873 - 1215163 | 11122.5 |
| crispr-associated endonuclease cas1, dvulg subtype | BACPLE_01064 | Not Available | Negative | 1215169 - 1216191 | 38573.0 |
| crispr-associated protein cas4 | BACPLE_01065 | Not Available | Negative | 1216175 - 1216849 | 26382.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

