Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BACPLE_01046 | Not Available | Positive | 1196543 - 1197526 | 37222.1 |
| hypothetical protein | BACPLE_01047 | Not Available | Positive | 1197555 - 1198223 | 25865.7 |
| transporter, auxin efflux carrier (aec) family protein | BACPLE_01048 | Not Available | Negative | 1198226 - 1199134 | 33128.4 |
| thioredoxin | BACPLE_01049 | Not Available | Positive | 1199315 - 1199614 | 11457.2 |
| hypothetical protein | BACPLE_01050 | Not Available | Positive | 1199656 - 1200390 | 27408.5 |
| putative membrane protein | BACPLE_01051 | Not Available | Positive | 1200483 - 1201373 | 31298.6 |
| exonuclease | BACPLE_01052 | Not Available | Positive | 1201396 - 1201887 | 18611.8 |
| hypothetical protein | BACPLE_01053 | Not Available | Positive | 1201998 - 1202219 | 8502.05 |
| hypothetical protein | BACPLE_01054 | Not Available | Positive | 1202226 - 1202417 | 7480.05 |
| outer membrane efflux protein | BACPLE_01055 | Not Available | Negative | 1202573 - 1203886 | 48922.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

