Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative esterase | BACPLE_01026 | Not Available | Positive | 1178876 - 1180174 | 47793.4 |
| histidine kinase | BACPLE_01027 | Not Available | Positive | 1180158 - 1181258 | 43559.2 |
| lyttr dna-binding domain protein | BACPLE_01028 | Not Available | Positive | 1181255 - 1181956 | 27219.1 |
| transporter, major facilitator family protein | BACPLE_01029 | Not Available | Negative | 1181953 - 1183128 | 43212.7 |
| hypothetical protein | BACPLE_01030 | Not Available | Positive | 1183265 - 1183543 | 10849.2 |
| mate efflux family protein | BACPLE_01031 | Not Available | Negative | 1184259 - 1185746 | 53237.8 |
| aminotransferase, class i/ii | BACPLE_01032 | Not Available | Negative | 1185751 - 1186929 | 44681.2 |
| hypothetical protein | BACPLE_01033 | Not Available | Negative | 1186942 - 1187829 | 34056.9 |
| hypothetical protein | BACPLE_01034 | Not Available | Positive | 1187876 - 1188067 | 7267.02 |
| bile acid transporter | BACPLE_01035 | Not Available | Positive | 1188064 - 1189014 | 33231.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

