Phocaeicola plebeius DSM 17135

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola plebeius DSM 17135 is a Gram-negative, non-sporulating rod-shaped bacterium classified within the intestinal microflora of animals. This organism is a chemoheterotroph, deriving its energy from organic compounds, and operates as an anaerobe, thriving in oxygen-depleted environments typical of the gastrointestinal tract. As a member of the animal intestinal microbiota, Phocaeicola plebeius may play a significant role in the digestive processes and overall health of its host. Its absence or imbalance could potentially disrupt normal gut function, highlighting its importance in maintaining the homeostasis of the intestinal ecosystem. Furthermore, the specific adaptation to an anaerobic lifestyle suggests that Phocaeicola plebeius may be involved in the fermentation processes, contributing to the breakdown of complex carbohydrates and the production of short-chain fatty acids, which are beneficial for host metabolism. Overall, the traits of Phocaeicola plebeius underline its specialized ecological niche and suggest potential implications for gut health and microbial interactions within the animal intestinal environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola plebeius
StrainDSM 17135

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola plebeius DSM 17135
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatAnimal intestinal microflora
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola plebeius DSM 17135 B_plebeius-2.0.1_Cont2727, whole

Gene Summary

Adenine Count

1232116 bp

Thymine Count

1229996 bp

Guanine Count

991003 bp

Cytosine Count

968209 bp

Genome Length

4421324 bp

Protein-coding Genes

3919 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
susd family proteinBACPLE_01006Not AvailableNegative1144803 - 114661468625.0
tonb-linked outer membrane protein, susc/raga familyBACPLE_01007Not AvailableNegative1146627 - 1149830119911.0
glycosyl hydrolase family 49BACPLE_01008Not AvailableNegative1149943 - 115162862833.3
leucine rich repeat proteinBACPLE_01009Not AvailableNegative1151716 - 115386677905.0
carbohydrate binding module (family 6)BACPLE_01010Not AvailableNegative1154022 - 115542551959.3
hypothetical proteinBACPLE_01011Not AvailableNegative1155497 - 115654338255.1
arylsulfataseBACPLE_01012Not AvailableNegative1156530 - 115807758197.6
arylsulfataseBACPLE_01013Not AvailableNegative1158096 - 115968860625.6
glycosyl hydrolase, family 43BACPLE_01014Not AvailableNegative1159783 - 116223692275.1
glycosyl hydrolase family 2, sugar binding domain proteinBACPLE_01015Not AvailableNegative1162367 - 1165312111844.0

Displaying genes 1011 – 1020 of 4023 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.