Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | BACPLE_01006 | Not Available | Negative | 1144803 - 1146614 | 68625.0 |
| tonb-linked outer membrane protein, susc/raga family | BACPLE_01007 | Not Available | Negative | 1146627 - 1149830 | 119911.0 |
| glycosyl hydrolase family 49 | BACPLE_01008 | Not Available | Negative | 1149943 - 1151628 | 62833.3 |
| leucine rich repeat protein | BACPLE_01009 | Not Available | Negative | 1151716 - 1153866 | 77905.0 |
| carbohydrate binding module (family 6) | BACPLE_01010 | Not Available | Negative | 1154022 - 1155425 | 51959.3 |
| hypothetical protein | BACPLE_01011 | Not Available | Negative | 1155497 - 1156543 | 38255.1 |
| arylsulfatase | BACPLE_01012 | Not Available | Negative | 1156530 - 1158077 | 58197.6 |
| arylsulfatase | BACPLE_01013 | Not Available | Negative | 1158096 - 1159688 | 60625.6 |
| glycosyl hydrolase, family 43 | BACPLE_01014 | Not Available | Negative | 1159783 - 1162236 | 92275.1 |
| glycosyl hydrolase family 2, sugar binding domain protein | BACPLE_01015 | Not Available | Negative | 1162367 - 1165312 | 111844.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

