Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | DSM 17135 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1232116 bp
Thymine Count
1229996 bp
Guanine Count
991003 bp
Cytosine Count
968209 bp
Genome Length
4421324 bp
Protein-coding Genes
3919 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial sugar transferase | BACPLE_00064 | Not Available | Positive | 63738 - 64346 | 23159.6 |
| atp-grasp domain protein | BACPLE_00065 | Not Available | Positive | 64333 - 65322 | 38123.4 |
| had hydrolase, family ia, variant 1 | BACPLE_00066 | Not Available | Positive | 65312 - 65974 | 25894.5 |
| degt/dnrj/eryc1/strs aminotransferase family protein | BACPLE_00067 | Not Available | Positive | 66044 - 67186 | 42377.9 |
| putative transposase, mutator family | BACPLE_00068 | Not Available | Negative | 67572 - 68276 | 26419.6 |
| hypothetical protein | BACPLE_00069 | Not Available | Negative | 68207 - 68524 | 12129.7 |
| hypothetical protein | BACPLE_00070 | Not Available | Negative | 68831 - 68956 | 4690.94 |
| hypothetical protein | BACPLE_00071 | Not Available | Negative | 69014 - 69133 | 4418.22 |
| nad dependent epimerase/dehydratase family protein | BACPLE_00072 | Not Available | Negative | 69359 - 70390 | 39202.3 |
| hypothetical protein | BACPLE_00073 | Not Available | Negative | 70395 - 71291 | 34446.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

