Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
837910 bp
Thymine Count
866653 bp
Guanine Count
1182103 bp
Cytosine Count
1111295 bp
Genome Length
4001860 bp
Protein-coding Genes
3862 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHM7688_00322 | Not Available | Positive | 348877 - 349551 | 25484.9 |
| hypothetical protein | SHM7688_00323 | Not Available | Positive | 349742 - 350842 | 39950.5 |
| hypothetical protein | SHM7688_00324 | Q1GK31 | Positive | 351144 - 351986 | 30483.9 |
| hypothetical protein | SHM7688_00325 | Q5LW58 | Positive | 351990 - 352268 | 10521.7 |
| hypothetical protein | SHM7688_00326 | Q1GK29 | Positive | 352272 - 352652 | 14089.4 |
| hypothetical protein | SHM7688_00327 | Q1GK28 | Positive | 352652 - 353359 | 26553.3 |
| 50s ribosomal protein l16 | SHM7688_00328 | Q1GK27 | Positive | 353373 - 353786 | 15611.3 |
| hypothetical protein | SHM7688_00329 | Not Available | Positive | 353894 - 354082 | 6989.38 |
| ribose and galactose chemoreceptor protein | SHM7688_00330 | Not Available | Negative | 354038 - 356212 | 77397.1 |
| hypothetical protein | SHM7688_00331 | Not Available | Positive | 356422 - 357042 | 23438.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
