Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia marina |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
837910 bp
Thymine Count
866653 bp
Guanine Count
1182103 bp
Cytosine Count
1111295 bp
Genome Length
4001860 bp
Protein-coding Genes
3862 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHM7688_02162 | Not Available | Positive | 2215708 - 2215917 | 8055.57 |
| hypothetical protein | SHM7688_02163 | Not Available | Negative | 2216462 - 2217058 | 22285.3 |
| putative transcriptional regulator | SHM7688_02164 | Not Available | Positive | 2217193 - 2217405 | 7983.83 |
| hypothetical protein | SHM7688_02165 | Not Available | Positive | 2217527 - 2217700 | 6003.56 |
| hypothetical protein | SHM7688_02166 | Not Available | Positive | 2217693 - 2217887 | 7262.49 |
| site-specific recombinase xerd | SHM7688_02167 | Not Available | Positive | 2217922 - 2219238 | 49307.2 |
| hypothetical protein | SHM7688_02168 | Not Available | Positive | 2219235 - 2219408 | 6419.42 |
| hypothetical protein | SHM7688_02169 | Not Available | Positive | 2219541 - 2220029 | 17486.2 |
| tellurite resistance protein terb | SHM7688_02170 | Not Available | Positive | 2220022 - 2220846 | 29945.9 |
| hypothetical protein | SHM7688_02171 | Not Available | Negative | 2221104 - 2221313 | 8011.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
