Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Virion protein | DXB87_01370 | Not Available | Positive | 304477 - 304893 | 15924.9 |
| hypothetical protein | DXB87_01375 | Not Available | Positive | 304922 - 305629 | 24934.0 |
| Hypothetical protein | DXB87_01380 | Not Available | Positive | 305626 - 306189 | 22130.9 |
| 1_nc_021802: hypothetical protein | DXB87_01385 | Not Available | Negative | 306231 - 306632 | 14708.3 |
| hypothetical protein | DXB87_01390 | Not Available | Negative | 306819 - 307484 | 25456.1 |
| Hypothetical protein | DXB87_01395 | Not Available | Negative | 307575 - 307868 | 11149.2 |
| hypothetical protein | DXB87_01400 | Not Available | Negative | 307852 - 308253 | 15824.9 |
| Hypothetical protein | DXB87_01405 | Not Available | Negative | 308255 - 308770 | 20458.5 |
| hypothetical protein | DXB87_01410 | Not Available | Negative | 308767 - 309174 | 16016.0 |
| Hypothetical protein | DXB87_01415 | Not Available | Negative | 309171 - 310436 | 47347.3 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

