Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_04820 | Not Available | Negative | 1000669 - 1000875 | 7749.97 |
| translational gtpase typa | DXB87_04825 | Not Available | Positive | 1000865 - 1002667 | 67447.5 |
| lta synthase family protein | DXB87_04830 | Not Available | Negative | 1002753 - 1004726 | 75581.6 |
| serine/threonine protein phosphatase | DXB87_04835 | Not Available | Positive | 1004827 - 1006191 | 52893.7 |
| mboat family protein | DXB87_04840 | Not Available | Positive | 1006203 - 1007645 | 56487.6 |
| hypothetical protein | DXB87_04845 | Not Available | Positive | 1007676 - 1008608 | 35962.1 |
| lipopolysaccharide biosynthesis protein | DXB87_04850 | Not Available | Negative | 1008673 - 1009683 | 40235.5 |
| glycosyltransferase family 8 protein | DXB87_04855 | Not Available | Positive | 1009791 - 1010717 | 36630.2 |
| capsular biosynthesis protein | DXB87_04860 | Not Available | Positive | 1010782 - 1011675 | 34862.3 |
| licd family protein | DXB87_04865 | Not Available | Positive | 1011811 - 1012722 | 35701.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

