Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_04570 | Not Available | Positive | 941067 - 945833 | 165928.0 |
| hypothetical protein | DXB87_04575 | Not Available | Positive | 945883 - 946176 | 11005.0 |
| rna-binding protein | DXB87_04580 | Not Available | Positive | 946176 - 946499 | 12505.7 |
| hypothetical protein | DXB87_04585 | Not Available | Positive | 946608 - 947288 | 24759.0 |
| hypothetical protein | DXB87_04590 | Not Available | Positive | 947281 - 948213 | 34975.8 |
| hypothetical protein | DXB87_04595 | Not Available | Positive | 948210 - 949103 | 32932.9 |
| hypothetical protein | DXB87_04600 | Not Available | Positive | 949093 - 949659 | 22490.0 |
| hypothetical protein | DXB87_04605 | Not Available | Positive | 949656 - 952238 | 93756.3 |
| hypothetical protein | DXB87_04610 | Not Available | Positive | 952353 - 952847 | 19796.3 |
| hypothetical protein | DXB87_04615 | Not Available | Positive | 953129 - 954388 | 47813.1 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

