Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_04520 | Not Available | Positive | 926690 - 927046 | 13490.6 |
| hypothetical protein | DXB87_04525 | Not Available | Positive | 927058 - 927243 | 7336.93 |
| phage tail tape measure protein | DXB87_04530 | Not Available | Positive | 927337 - 931179 | 139955.0 |
| hypothetical protein | DXB87_04535 | Not Available | Positive | 931192 - 932169 | 36779.1 |
| hypothetical protein | DXB87_04540 | Not Available | Positive | 932160 - 933485 | 49096.5 |
| tir domain-containing protein | DXB87_04545 | Not Available | Negative | 933495 - 934697 | 46241.4 |
| hypothetical protein | DXB87_04550 | Not Available | Positive | 934767 - 935657 | 32297.1 |
| hypothetical protein | DXB87_04555 | Not Available | Positive | 935654 - 937342 | 60863.4 |
| hypothetical protein | DXB87_04560 | Not Available | Positive | 937346 - 939616 | 83919.3 |
| hypothetical protein | DXB87_04565 | Not Available | Positive | 939621 - 940931 | 45497.6 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

