Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_04470 | Not Available | Positive | 917732 - 918436 | 26967.6 |
| clp protease clpp | DXB87_04475 | Not Available | Positive | 918720 - 919958 | 45042.5 |
| hypothetical protein | DXB87_04480 | Not Available | Positive | 920085 - 921134 | 39626.2 |
| hypothetical protein | DXB87_04485 | Not Available | Positive | 921210 - 921557 | 12328.3 |
| hypothetical protein | DXB87_04490 | Not Available | Positive | 921557 - 922909 | 49352.7 |
| hypothetical protein | DXB87_04495 | Not Available | Positive | 922913 - 923368 | 16514.4 |
| adenine methyltransferase | DXB87_04500 | Not Available | Positive | 923375 - 923866 | 18422.0 |
| serine/threonine protein phosphatase | DXB87_04505 | Not Available | Negative | 923951 - 924715 | 29277.5 |
| hypothetical protein | DXB87_04510 | Not Available | Negative | 924712 - 925494 | 29692.1 |
| hypothetical protein | DXB87_04515 | Not Available | Negative | 925488 - 926471 | 37820.1 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

