Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlob domain-containing protein | DXB87_04420 | Not Available | Positive | 910734 - 911366 | 23890.6 |
| hypothetical protein | DXB87_04425 | Not Available | Negative | 911491 - 911961 | 18606.6 |
| hypothetical protein | DXB87_04430 | Not Available | Negative | 911948 - 912187 | 9105.87 |
| hypothetical protein | DXB87_04435 | Not Available | Negative | 912344 - 912781 | 16595.6 |
| dna-binding protein | DXB87_04440 | Not Available | Negative | 912784 - 913917 | 43725.0 |
| hypothetical protein | DXB87_04445 | Not Available | Negative | 913904 - 914242 | 12510.2 |
| hypothetical protein | DXB87_04450 | Not Available | Negative | 914253 - 914750 | 19309.1 |
| duf935 family protein | DXB87_04455 | Not Available | Positive | 914994 - 916316 | 49935.5 |
| hypothetical protein | DXB87_04460 | Not Available | Positive | 916541 - 917176 | 24172.6 |
| hypothetical protein | DXB87_04465 | Not Available | Positive | 917157 - 917735 | 22137.3 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

