Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_04320 | Not Available | Negative | 898460 - 899107 | 24405.1 |
| hypothetical protein | DXB87_04325 | Not Available | Negative | 899136 - 899381 | 9436.3 |
| hypothetical protein | DXB87_04330 | Not Available | Negative | 899394 - 899573 | 6872.4 |
| hypothetical protein | DXB87_04335 | Not Available | Negative | 899584 - 899904 | 12033.9 |
| hypothetical protein | DXB87_04340 | Not Available | Negative | 899910 - 900389 | 18145.7 |
| duf3846 domain-containing protein | DXB87_04345 | Not Available | Negative | 900394 - 900669 | 9997.97 |
| hypothetical protein | DXB87_04350 | Not Available | Negative | 900685 - 901143 | 17501.4 |
| hypothetical protein | DXB87_04355 | Not Available | Negative | 901140 - 902030 | 36033.0 |
| hypothetical protein | DXB87_04360 | Not Available | Negative | 902041 - 903138 | 42155.7 |
| hypothetical protein | DXB87_04365 | Not Available | Negative | 903179 - 903706 | 20132.7 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

