Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_04220 | Not Available | Negative | 886451 - 887236 | 30376.1 |
| hypothetical protein | DXB87_04225 | Not Available | Negative | 887215 - 888027 | 31074.1 |
| hypothetical protein | DXB87_04230 | Not Available | Negative | 888049 - 888264 | 8505.63 |
| hypothetical protein | DXB87_04235 | Not Available | Negative | 888280 - 888816 | 20037.4 |
| hypothetical protein | DXB87_04240 | Not Available | Negative | 888819 - 889841 | 39639.8 |
| hypothetical protein | DXB87_04245 | Not Available | Negative | 889901 - 890110 | 7995.53 |
| hypothetical protein | DXB87_04250 | Not Available | Negative | 890112 - 890330 | 8590.33 |
| hypothetical protein | DXB87_04255 | Not Available | Negative | 890382 - 890729 | 13451.6 |
| hypothetical protein | DXB87_04260 | Not Available | Negative | 890729 - 891661 | 37581.8 |
| hypothetical protein | DXB87_04265 | Not Available | Negative | 891642 - 891878 | 9106.61 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

