Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_04170 | Not Available | Negative | 878730 - 879158 | 16191.9 |
| hypothetical protein | DXB87_04175 | Not Available | Negative | 879169 - 879489 | 12479.2 |
| thrombopoietin receptor | DXB87_04180 | Not Available | Negative | 879490 - 879840 | 13556.2 |
| tyrosine protein kinase | DXB87_04185 | Not Available | Negative | 879837 - 880508 | 25508.3 |
| hypothetical protein | DXB87_04190 | Not Available | Negative | 880649 - 881521 | 34502.0 |
| hypothetical protein | DXB87_04195 | Not Available | Negative | 881518 - 883422 | 73610.4 |
| hypothetical protein | DXB87_04200 | Not Available | Negative | 883409 - 883999 | 22580.2 |
| hypothetical protein | DXB87_04205 | Not Available | Negative | 884130 - 884798 | 25887.1 |
| integrase | DXB87_04210 | Not Available | Negative | 884880 - 885470 | 23431.5 |
| duf932 domain-containing protein | DXB87_04215 | Not Available | Negative | 885482 - 886381 | 34081.8 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

