Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | DXB87_04070 | Not Available | Positive | 868121 - 868888 | 28141.6 |
| hypothetical protein | DXB87_04075 | Not Available | Negative | 869229 - 869432 | 7928.88 |
| ribonuclease h | DXB87_04080 | Not Available | Negative | 869443 - 869841 | 15022.0 |
| hypothetical protein | DXB87_04085 | Not Available | Negative | 869838 - 870368 | 19843.1 |
| hypothetical protein | DXB87_04090 | Not Available | Negative | 870531 - 871187 | 24936.7 |
| hypothetical protein | DXB87_04095 | Not Available | Negative | 871159 - 871482 | 12043.5 |
| hypothetical protein | DXB87_04100 | Not Available | Negative | 871637 - 872047 | 15933.1 |
| hypothetical protein | DXB87_04105 | Not Available | Negative | 872061 - 872369 | 11688.5 |
| hypothetical protein | DXB87_04110 | Not Available | Negative | 872392 - 873048 | 25697.2 |
| hypothetical protein | DXB87_04115 | Not Available | Negative | 873052 - 873387 | 13419.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

