Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2461 domain-containing protein | DXB87_03870 | Not Available | Positive | 811277 - 811942 | 25867.7 |
| duf386 domain-containing protein | DXB87_03875 | Not Available | Positive | 811971 - 812414 | 16440.9 |
| 1,4-alpha-glucan-branching enzyme | DXB87_03880 | Not Available | Positive | 812433 - 814445 | 77869.2 |
| hypothetical protein | DXB87_03885 | Not Available | Positive | 814457 - 815608 | 44338.6 |
| hypothetical protein | DXB87_03890 | Not Available | Positive | 815592 - 815849 | 9873.46 |
| pd-(d/e)xk nuclease family protein | DXB87_03895 | Not Available | Negative | 815827 - 818700 | 110500.0 |
| dna2/cas4 domain-containing protein | DXB87_03900 | Not Available | Negative | 818739 - 821966 | 123881.0 |
| hypothetical protein | DXB87_03905 | Not Available | Positive | 822401 - 824638 | 82887.8 |
| Trna-arg | Not Available | Not Available | Positive | 824770 - 824843 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 824870 - 824943 | Not Available |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

