Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase | DXB87_03815 | Not Available | Positive | 799440 - 801203 | 67735.4 |
| duf2075 domain-containing protein | DXB87_03820 | Not Available | Positive | 801240 - 802433 | 45948.2 |
| hypothetical protein | DXB87_03825 | Not Available | Positive | 802430 - 803068 | 25177.7 |
| restriction endonuclease subunit r | DXB87_03830 | Not Available | Positive | 803073 - 805769 | 102971.0 |
| duf3791 domain-containing protein | DXB87_03840 | Not Available | Positive | 806568 - 806789 | 8815.44 |
| hypothetical protein | DXB87_03845 | Not Available | Positive | 806786 - 807022 | 9117.86 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DXB87_03850 | Not Available | Positive | 807178 - 807939 | 28219.7 |
| insulinase family protein | DXB87_03855 | Not Available | Positive | 807936 - 809228 | 49252.0 |
| phosphatidylinositol-4-phosphate 5-kinase | DXB87_03860 | Not Available | Positive | 809294 - 810421 | 42847.0 |
| inositol monophosphatase | DXB87_03865 | Not Available | Positive | 810421 - 811203 | 29070.5 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

