Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DXB87_03600 | Not Available | Negative | 756974 - 757660 | 26192.0 |
| type i asparaginase | DXB87_03605 | Not Available | Negative | 757764 - 758813 | 38750.0 |
| tryptophan synthase subunit alpha | DXB87_03610 | Not Available | Negative | 758900 - 759679 | 29199.4 |
| phosphoribosylanthranilate isomerase | DXB87_03615 | Not Available | Negative | 759692 - 760315 | 23305.6 |
| indole-3-glycerol phosphate synthase trpc | DXB87_03620 | Not Available | Negative | 760312 - 761100 | 28904.9 |
| anthranilate phosphoribosyltransferase | DXB87_03625 | Not Available | Negative | 761108 - 762103 | 36384.9 |
| aminodeoxychorismate/anthranilate synthase component ii | DXB87_03630 | Not Available | Negative | 762146 - 762712 | 21080.3 |
| anthranilate synthase component i family protein | DXB87_03635 | Not Available | Negative | 762709 - 764118 | 53039.6 |
| tryptophan synthase subunit beta | DXB87_03640 | Not Available | Negative | 764131 - 765327 | 43868.8 |
| dna alkylation repair protein | DXB87_03645 | Not Available | Positive | 765639 - 766349 | 27784.7 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

