Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| a/g-specific adenine glycosylase | DXB87_03550 | Not Available | Positive | 744673 - 745737 | 40989.3 |
| single-stranded dna-binding protein | DXB87_03555 | Not Available | Positive | 745742 - 746167 | 15543.3 |
| gliding motility-associated protein glde | DXB87_03560 | Not Available | Positive | 746211 - 747572 | 51592.3 |
| hypothetical protein | DXB87_03565 | Not Available | Positive | 747575 - 748237 | 25518.7 |
| asma family protein | DXB87_03570 | Not Available | Positive | 748260 - 751256 | 111599.0 |
| mfs transporter | DXB87_03575 | Not Available | Positive | 751358 - 752875 | 55097.3 |
| hypothetical protein | DXB87_03580 | Not Available | Positive | 753102 - 753323 | 8391.13 |
| hypothetical protein | DXB87_03585 | Not Available | Positive | 753354 - 754295 | 37465.1 |
| hypothetical protein | DXB87_03590 | Not Available | Positive | 754466 - 754864 | 15117.6 |
| two-component sensor histidine kinase | DXB87_03595 | Not Available | Negative | 755169 - 756956 | 69011.0 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

