Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bax inhibitor (bi)-1/ycca family protein | DXB87_03450 | Not Available | Positive | 722340 - 723041 | 25957.7 |
| pyridoxal phosphate-dependent aminotransferase | DXB87_03455 | Not Available | Positive | 723127 - 724320 | 43417.1 |
| 4fe-4s dicluster domain-containing protein | DXB87_03460 | Not Available | Negative | 724599 - 724766 | 5631.56 |
| beta-n-acetylglucosaminidase | DXB87_03465 | Not Available | Negative | 724888 - 727857 | 110390.0 |
| bifunctional metallophosphatase/5'-nucleotidase | DXB87_03470 | Not Available | Negative | 727873 - 728715 | 31366.8 |
| 5'-nucleotidase | DXB87_03475 | Not Available | Negative | 728730 - 729512 | 27983.9 |
| 50s ribosomal protein l19 | DXB87_03480 | Not Available | Positive | 729740 - 730093 | 13103.2 |
| hypothetical protein | DXB87_03485 | Not Available | Negative | 730676 - 731017 | 13046.8 |
| hypothetical protein | DXB87_03490 | Not Available | Negative | 731022 - 731330 | 12227.8 |
| dna repair protein | DXB87_03495 | Not Available | Negative | 731985 - 732431 | 16948.6 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

