Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (d)cmp kinase | DXB87_03300 | Not Available | Positive | 680917 - 681615 | 26136.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DXB87_03305 | Not Available | Positive | 681602 - 682465 | 32560.2 |
| 6-phosphofructokinase | DXB87_03310 | Not Available | Positive | 682544 - 683524 | 35283.4 |
| extracellular solute-binding protein | DXB87_03315 | Not Available | Negative | 683610 - 684938 | 51105.3 |
| abc transporter permease | DXB87_03320 | Not Available | Negative | 684947 - 685738 | 28716.2 |
| abc transporter permease | DXB87_03325 | Not Available | Negative | 685732 - 686529 | 29810.1 |
| polyamine abc transporter atp-binding protein | DXB87_03330 | Not Available | Negative | 686526 - 687926 | 52563.5 |
| methylmalonyl co-a mutase-associated gtpase meab | DXB87_03335 | Not Available | Negative | 688047 - 689153 | 40831.9 |
| duf1573 domain-containing protein | DXB87_03340 | Not Available | Negative | 689162 - 690247 | 39941.7 |
| alpha-2-macroglobulin | DXB87_03345 | Not Available | Negative | 690389 - 695998 | 212163.0 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

