Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 673573 - 673654 | Not Available |
| mate family efflux transporter | DXB87_03255 | Not Available | Positive | 673728 - 675086 | 50548.6 |
| biopolymer transporter exbd | DXB87_03260 | Not Available | Negative | 675298 - 675762 | 17900.0 |
| biopolymer transporter exbd | DXB87_03265 | Not Available | Negative | 675765 - 676352 | 22221.3 |
| hypothetical protein | DXB87_03270 | Not Available | Negative | 676395 - 676859 | 16389.8 |
| mota/tolq/exbb proton channel family protein | DXB87_03275 | Not Available | Negative | 676868 - 677668 | 28400.3 |
| Trna-ser | Not Available | Not Available | Positive | 677728 - 677818 | Not Available |
| tatd family deoxyribonuclease | DXB87_03285 | Not Available | Negative | 677957 - 678748 | 29913.8 |
| polyprenyl synthetase family protein | DXB87_03290 | Not Available | Negative | 678753 - 679736 | 37545.8 |
| energy transducer tonb | DXB87_03295 | Not Available | Negative | 679814 - 680500 | 25865.1 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

