Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_03080 | Not Available | Negative | 636645 - 637886 | 45960.8 |
| carbon starvation protein a | DXB87_03085 | Not Available | Negative | 637954 - 639384 | 52406.6 |
| s-layer protein | DXB87_03090 | Not Available | Positive | 639562 - 641220 | 62999.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | DXB87_03095 | Not Available | Positive | 641303 - 642472 | 42845.3 |
| hypothetical protein | DXB87_03100 | Not Available | Positive | 642533 - 642802 | 10266.0 |
| peptide chain release factor 1 | DXB87_03105 | Not Available | Positive | 642848 - 643957 | 41627.2 |
| orotidine-5'-phosphate decarboxylase | DXB87_03110 | Not Available | Positive | 644028 - 644852 | 30988.3 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DXB87_03115 | Not Available | Positive | 645124 - 646164 | 37244.9 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DXB87_03120 | Not Available | Positive | 646169 - 647554 | 51551.7 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DXB87_03125 | Not Available | Positive | 647556 - 648323 | 27802.7 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

