Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | DXB87_00010 | Not Available | Negative | 1034 - 1882 | 33079.3 |
| helix-turn-helix transcriptional regulator | DXB87_00020 | Not Available | Positive | 2763 - 3551 | 30600.9 |
| duf4091 domain-containing protein | DXB87_00025 | Not Available | Positive | 3682 - 5460 | 67724.0 |
| omph family outer membrane protein | DXB87_00030 | Not Available | Negative | 5538 - 6134 | 22735.2 |
| hypothetical protein | DXB87_00035 | Not Available | Negative | 6172 - 6399 | 8311.41 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 6433 - 7966 | Not Available |
| aminoacyl-histidine dipeptidase | DXB87_00040 | Not Available | Positive | 6544 - 8001 | 53364.2 |
| endonuclease | DXB87_00045 | Not Available | Positive | 8040 - 9017 | 36931.3 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 8420 - 11306 | Not Available |
| hypothetical protein | DXB87_00050 | Not Available | Positive | 9508 - 10458 | 36421.1 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

