Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_02980 | Not Available | Positive | 611343 - 612413 | 40998.1 |
| sam-dependent methyltransferase | DXB87_02985 | Not Available | Negative | 612417 - 613121 | 26112.0 |
| gliding motility lipoprotein gldb | DXB87_02990 | Not Available | Negative | 613141 - 614133 | 39050.2 |
| enoyl-acp reductase | DXB87_02995 | Not Available | Negative | 614140 - 614997 | 31309.5 |
| duf4861 domain-containing protein | DXB87_03000 | Not Available | Positive | 615316 - 616539 | 46132.6 |
| rok family protein | DXB87_03005 | Not Available | Negative | 616599 - 617573 | 34423.5 |
| abc transporter atp-binding protein | DXB87_03010 | Not Available | Positive | 617722 - 618441 | 26732.5 |
| abc transporter permease | DXB87_03015 | Not Available | Positive | 618452 - 619702 | 46106.2 |
| abc transporter permease | DXB87_03020 | Not Available | Positive | 619705 - 620949 | 46016.3 |
| efflux rnd transporter periplasmic adaptor subunit | DXB87_03025 | Not Available | Positive | 620985 - 622082 | 40153.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

