Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h nitroreductase | DXB87_02780 | Not Available | Positive | 567242 - 567778 | 19992.0 |
| hypothetical protein | DXB87_02785 | Not Available | Positive | 567778 - 568113 | 12272.7 |
| duf2520 domain-containing protein | DXB87_02790 | Not Available | Positive | 568110 - 568907 | 29973.9 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DXB87_02795 | Not Available | Positive | 568926 - 569444 | 19033.1 |
| septum formation protein maf | DXB87_02800 | Not Available | Positive | 569454 - 570050 | 22692.4 |
| glycosyltransferase family 2 protein | DXB87_02805 | Not Available | Negative | 570047 - 571069 | 39238.1 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DXB87_02810 | Not Available | Negative | 571066 - 572382 | 48920.8 |
| hypothetical protein | DXB87_02815 | Not Available | Positive | 572685 - 572885 | 6468.49 |
| 50s ribosomal protein l9 | DXB87_02820 | Not Available | Negative | 573241 - 573690 | 16203.9 |
| 30s ribosomal protein s18 | DXB87_02825 | Not Available | Negative | 573709 - 573978 | 10561.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

