Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein | DXB87_02715 | Not Available | Positive | 553916 - 554362 | 16970.6 |
| site-specific integrase | DXB87_02720 | Not Available | Positive | 554518 - 555105 | 22703.9 |
| hypothetical protein | DXB87_02725 | Not Available | Positive | 555557 - 555877 | 12211.2 |
| hypothetical protein | DXB87_02730 | Not Available | Positive | 555901 - 557214 | 50093.1 |
| sodium ion-translocating decarboxylase subunit beta | DXB87_02750 | Not Available | Negative | 561450 - 562610 | 40907.3 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DXB87_02755 | Not Available | Negative | 562613 - 563041 | 15265.7 |
| lamin tail domain-containing protein | DXB87_02760 | Not Available | Negative | 563064 - 563993 | 34390.1 |
| acyl-coa carboxylase subunit beta | DXB87_02765 | Not Available | Negative | 564019 - 565572 | 56425.9 |
| methylmalonyl-coa epimerase | DXB87_02770 | Not Available | Negative | 565622 - 566026 | 14526.6 |
| gnat family n-acetyltransferase | DXB87_02775 | Not Available | Negative | 566192 - 567166 | 38151.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

