Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_02665 | Not Available | Negative | 543534 - 544322 | 29365.2 |
| duf4375 domain-containing protein | DXB87_02670 | Not Available | Negative | 544495 - 545004 | 19732.2 |
| hypothetical protein | DXB87_02675 | Not Available | Positive | 545296 - 545997 | 25225.5 |
| gggtgrt protein | DXB87_02680 | Not Available | Positive | 546018 - 547028 | 35868.1 |
| site-specific integrase | DXB87_02685 | Not Available | Positive | 547397 - 548614 | 46873.0 |
| hypothetical protein | DXB87_02690 | Not Available | Positive | 548695 - 549537 | 32470.0 |
| hypothetical protein | DXB87_02695 | Not Available | Negative | 549485 - 549769 | 10938.5 |
| hypothetical protein | DXB87_02700 | Not Available | Positive | 549815 - 550732 | 34702.7 |
| hypothetical protein | DXB87_02705 | Not Available | Positive | 550897 - 552507 | 61813.6 |
| duf3871 family protein | DXB87_02710 | Not Available | Positive | 552841 - 553833 | 37411.8 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

