Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DXB87_02565 | Not Available | Positive | 517597 - 521577 | 152436.0 |
| chromate transporter | DXB87_02570 | Not Available | Positive | 521588 - 522130 | 20498.9 |
| chromate transporter | DXB87_02575 | Not Available | Positive | 522144 - 522713 | 20573.7 |
| chromosome partitioning protein parb | DXB87_02580 | Not Available | Negative | 522722 - 523258 | 20342.6 |
| duf3440 domain-containing protein | DXB87_02585 | Not Available | Negative | 523255 - 524553 | 51840.4 |
| hypothetical protein | DXB87_02590 | Not Available | Negative | 524540 - 524947 | 15818.8 |
| abc transporter atp-binding protein | DXB87_02595 | Not Available | Negative | 525023 - 526036 | 37436.3 |
| iron abc transporter permease | DXB87_02600 | Not Available | Negative | 526036 - 527076 | 36271.8 |
| abc transporter substrate-binding protein | DXB87_02605 | Not Available | Negative | 527073 - 528209 | 42561.0 |
| hypothetical protein | DXB87_02610 | Not Available | Negative | 528215 - 529315 | 40803.1 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

