Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | DXB87_02510 | Not Available | Positive | 499241 - 502345 | 113060.0 |
| tolc family protein | DXB87_02515 | Not Available | Positive | 502364 - 503746 | 51468.2 |
| gnat family n-acetyltransferase | DXB87_02520 | Not Available | Negative | 503811 - 504347 | 20772.6 |
| peptidase m64 | DXB87_02525 | Not Available | Negative | 504369 - 505655 | 48566.5 |
| tonb-dependent receptor | DXB87_02530 | Not Available | Negative | 505924 - 508230 | 85997.6 |
| hypothetical protein | DXB87_02535 | Not Available | Positive | 508256 - 508534 | 10597.6 |
| bifunctional metallophosphatase/5'-nucleotidase | DXB87_02540 | Not Available | Negative | 508643 - 510346 | 64131.6 |
| rna-binding transcriptional accessory protein | DXB87_02545 | Not Available | Positive | 510560 - 512698 | 80158.4 |
| nad(+) diphosphatase | DXB87_02550 | Not Available | Positive | 512713 - 513510 | 29844.9 |
| phosphoglycerate kinase | DXB87_02560 | Not Available | Positive | 516198 - 517454 | 44323.7 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

