Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DXB87_01570 | Not Available | Negative | 327458 - 327709 | 9724.85 |
| hypothetical protein | DXB87_01575 | Not Available | Negative | 327706 - 327909 | 7690.23 |
| Attl | Not Available | Not Available | Positive | 328152 - 328163 | Not Available |
| lexa family transcriptional regulator | DXB87_01580 | Not Available | Positive | 328685 - 329455 | 28689.5 |
| hypothetical protein | DXB87_01585 | Not Available | Positive | 329457 - 329795 | 12922.5 |
| Integrase | DXB87_01590 | Not Available | Positive | 330123 - 331214 | 42922.6 |
| hypothetical protein | DXB87_01595 | Not Available | Negative | 331233 - 331418 | 7348.38 |
| site-specific integrase | DXB87_01600 | Not Available | Positive | 331647 - 332540 | 34610.8 |
| Attr | Not Available | Not Available | Positive | 333155 - 333166 | Not Available |
| is66 family transposase | DXB87_00005 | Not Available | Positive | 1 - 792 | 30511.0 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

