Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 440445 - 440529 | Not Available |
| duf255 domain-containing protein | DXB87_02250 | Not Available | Positive | 440800 - 442806 | 74231.4 |
| serine dehydratase subunit alpha family protein | DXB87_02255 | Not Available | Positive | 442812 - 444107 | 45787.4 |
| atp-binding protein | DXB87_02260 | Not Available | Positive | 444120 - 444761 | 24403.5 |
| alanine:cation symporter family protein | DXB87_02265 | Not Available | Positive | 444770 - 446170 | 50421.3 |
| hypothetical protein | DXB87_02270 | Not Available | Positive | 446217 - 446846 | 24221.0 |
| uracil-dna glycosylase family protein | DXB87_02275 | Not Available | Positive | 446843 - 447439 | 22988.8 |
| Trna-trp | Not Available | Not Available | Positive | 447513 - 447588 | Not Available |
| arginase family protein | DXB87_02285 | Not Available | Positive | 447720 - 448511 | 30205.4 |
| branched-chain amino acid aminotransferase | DXB87_02290 | Not Available | Negative | 448591 - 449610 | 37843.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

