Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3872 domain-containing protein | DXB87_02195 | Not Available | Positive | 435161 - 435619 | 17562.0 |
| hypothetical protein | DXB87_02200 | Not Available | Positive | 435632 - 435952 | 12471.6 |
| hypothetical protein | DXB87_02205 | Not Available | Negative | 436156 - 436638 | 18614.0 |
| duf3873 domain-containing protein | DXB87_02210 | Not Available | Negative | 436650 - 436871 | 8507.11 |
| hypothetical protein | DXB87_02215 | Not Available | Negative | 436894 - 437106 | 7820.27 |
| antirestriction protein arda | DXB87_02220 | Not Available | Negative | 437159 - 437692 | 21079.6 |
| hypothetical protein | DXB87_02225 | Not Available | Negative | 437721 - 437957 | 8928.02 |
| hypothetical protein | DXB87_02230 | Not Available | Negative | 437984 - 438184 | 7598.09 |
| orf6n domain-containing protein | DXB87_02235 | Not Available | Negative | 438327 - 438857 | 20259.8 |
| site-specific integrase | DXB87_02240 | Not Available | Negative | 438942 - 440171 | 46859.3 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

