Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3945 domain-containing protein | DXB87_02090 | Not Available | Negative | 416605 - 417927 | 49374.2 |
| hypothetical protein | DXB87_02100 | Not Available | Positive | 418472 - 419173 | 26763.7 |
| nucleotidyl transferase abieii/abigii toxin family protein | DXB87_02105 | Not Available | Positive | 419183 - 420199 | 38638.8 |
| conjugal transfer protein trag | DXB87_02110 | Not Available | Negative | 420243 - 422252 | 76911.5 |
| mobilization protein | DXB87_02115 | Not Available | Negative | 422273 - 423541 | 47448.6 |
| hypothetical protein | DXB87_02120 | Not Available | Negative | 423526 - 423948 | 16164.5 |
| hypothetical protein | DXB87_02125 | Not Available | Negative | 424084 - 424293 | 7785.61 |
| para family protein | DXB87_02130 | Not Available | Positive | 424510 - 425292 | 29095.2 |
| duf3408 domain-containing protein | DXB87_02135 | Not Available | Positive | 425294 - 425722 | 16325.2 |
| hypothetical protein | DXB87_02140 | Not Available | Positive | 425725 - 426354 | 22697.9 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

