Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1_nc_021788: spfh domain / band 7 family | DXB87_01520 | Not Available | Negative | 320872 - 321681 | 30907.1 |
| 1_nc_021804: hypothetical protein | DXB87_01525 | Not Available | Negative | 321843 - 322586 | 28323.0 |
| Hypothetical protein | DXB87_01530 | Not Available | Negative | 322593 - 322871 | 10419.8 |
| 1_nc_021804: hypothetical protein | DXB87_01535 | Not Available | Negative | 322875 - 323303 | 16658.8 |
| hypothetical protein | DXB87_01540 | Not Available | Negative | 323305 - 323604 | 11408.8 |
| hypothetical | DXB87_01545 | Not Available | Negative | 323591 - 324206 | 21750.1 |
| hypothetical protein | DXB87_01550 | Not Available | Negative | 324203 - 324427 | 8510.37 |
| Putative rect recombination protein | DXB87_01555 | Not Available | Negative | 324427 - 325335 | 33602.0 |
| hypothetical protein | DXB87_01560 | Not Available | Negative | 325332 - 326300 | 37510.4 |
| hypothetical protein | DXB87_01565 | Not Available | Negative | 326372 - 327073 | 27222.3 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

