Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_01835 | Not Available | Positive | 375103 - 375300 | 7681.53 |
| hypothetical protein | DXB87_01840 | Not Available | Positive | 375311 - 375862 | 21973.8 |
| arac family transcriptional regulator | DXB87_01845 | Not Available | Positive | 375893 - 376735 | 32598.4 |
| hypothetical protein | DXB87_01850 | Not Available | Positive | 376767 - 377669 | 35718.1 |
| dna-binding protein | DXB87_01855 | Not Available | Positive | 377774 - 378133 | 14278.1 |
| bifunctional dna primase/helicase | DXB87_01860 | Not Available | Positive | 378096 - 380168 | 77871.5 |
| hypothetical protein | DXB87_01865 | Not Available | Positive | 380198 - 380440 | 8887.91 |
| dihydrofolate reductase | DXB87_01870 | Not Available | Positive | 380576 - 381094 | 18968.7 |
| type ia dna topoisomerase | DXB87_01875 | Not Available | Negative | 381192 - 383279 | 76436.1 |
| duf3945 domain-containing protein | DXB87_01880 | Not Available | Negative | 383306 - 384628 | 49374.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

