Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase recf | DXB87_01780 | Not Available | Positive | 365986 - 367080 | 40868.2 |
| tetr family transcriptional regulator | DXB87_01785 | Not Available | Positive | 367085 - 367765 | 26031.1 |
| dna methylase | DXB87_01795 | Not Available | Negative | 368448 - 368588 | 4809.02 |
| atp-binding protein | DXB87_01800 | Not Available | Positive | 368810 - 370135 | 51854.5 |
| para family protein | DXB87_01805 | Not Available | Positive | 370177 - 371208 | 38683.3 |
| hypothetical protein | DXB87_01810 | Not Available | Positive | 371205 - 371870 | 25929.2 |
| is982 family transposase | DXB87_01815 | Not Available | Positive | 372163 - 373068 | 34984.1 |
| hypothetical protein | DXB87_01820 | Not Available | Positive | 373104 - 373658 | 21247.1 |
| hypothetical protein | DXB87_01825 | Not Available | Positive | 373739 - 374290 | 20894.6 |
| hypothetical protein | DXB87_01830 | Not Available | Positive | 374374 - 375051 | 26217.7 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

