Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | DXB87_01715 | Not Available | Negative | 356591 - 357658 | 40088.9 |
| xre family transcriptional regulator | DXB87_01720 | Not Available | Negative | 357639 - 357875 | 8814.81 |
| regulator | DXB87_01725 | Not Available | Negative | 358653 - 358892 | 8712.64 |
| hypothetical protein | DXB87_01735 | Not Available | Positive | 359336 - 359593 | 9599.57 |
| helix-turn-helix domain-containing protein | DXB87_01745 | Not Available | Positive | 360406 - 360603 | 7858.62 |
| dna-binding protein | DXB87_01750 | Not Available | Positive | 360619 - 360912 | 11406.7 |
| hypothetical protein | DXB87_01760 | Not Available | Negative | 362599 - 362817 | 7841.53 |
| dna-binding protein | DXB87_01765 | Not Available | Positive | 362852 - 363196 | 13196.8 |
| bifunctional dna primase/helicase | DXB87_01770 | Not Available | Positive | 363180 - 365225 | 77142.1 |
| dna-binding protein | DXB87_01775 | Not Available | Positive | 365238 - 365591 | 14445.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

