Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_01325 | Not Available | Positive | 298760 - 300079 | 46778.2 |
| hypothetical protein | DXB87_01330 | Not Available | Positive | 300334 - 300534 | 7571.4 |
| reverse transcriptase | DXB87_01335 | Not Available | Positive | 300596 - 301411 | 32171.9 |
| hypothetical protein | DXB87_01340 | Not Available | Positive | 301377 - 301607 | 8865.96 |
| hypothetical protein | DXB87_01345 | Not Available | Positive | 301792 - 302139 | 13224.7 |
| hypothetical protein | DXB87_01350 | Not Available | Positive | 302161 - 302556 | 15048.7 |
| hypothetical protein | DXB87_01355 | Not Available | Positive | 302563 - 303738 | 42880.6 |
| hypothetical protein | DXB87_01360 | Not Available | Positive | 303741 - 304004 | 10143.2 |
| hypothetical protein | DXB87_01365 | Not Available | Positive | 304032 - 304499 | 17873.2 |
| recombinase xerd | DXB87_01605 | Not Available | Positive | 332587 - 332916 | 12717.8 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

