Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | DXB87_01275 | Not Available | Positive | 284452 - 289932 | 203228.0 |
| hypothetical protein | DXB87_01280 | Not Available | Positive | 289929 - 290441 | 19379.1 |
| hypothetical protein | DXB87_01285 | Not Available | Positive | 291038 - 291778 | 28555.5 |
| hypothetical protein | DXB87_01290 | Not Available | Negative | 291865 - 292302 | 16522.1 |
| hypothetical protein | DXB87_01295 | Not Available | Negative | 292393 - 292611 | 8755.83 |
| hypothetical protein | DXB87_01300 | Not Available | Positive | 292909 - 293421 | 19130.7 |
| hypothetical protein | DXB87_01305 | Not Available | Positive | 293426 - 296296 | 106709.0 |
| hypothetical protein | DXB87_01310 | Not Available | Positive | 296293 - 297498 | 44554.0 |
| hypothetical protein | DXB87_01315 | Not Available | Positive | 297500 - 297733 | 8577.53 |
| hypothetical protein | DXB87_01320 | Not Available | Positive | 297717 - 298739 | 36499.4 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

