Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1_nc_021804: hypothetical protein | DXB87_01470 | Not Available | Negative | 314863 - 315228 | 14054.0 |
| hypothetical protein | DXB87_01475 | Not Available | Negative | 315283 - 315462 | 7361.95 |
| hypothetical protein | DXB87_01480 | Not Available | Negative | 315514 - 316098 | 22150.0 |
| tigr02757 family protein | DXB87_01485 | Not Available | Negative | 316107 - 316817 | 28268.9 |
| hypothetical protein | DXB87_01490 | Not Available | Negative | 316789 - 317391 | 23011.4 |
| Hypothetical protein | DXB87_01495 | Not Available | Negative | 317339 - 317758 | 16301.3 |
| Dna methyltransferase | DXB87_01500 | Not Available | Negative | 317764 - 318870 | 42562.3 |
| His-xaa-ser system radical sam maturase hxsc-like protein | DXB87_01505 | Not Available | Negative | 318855 - 319391 | 20719.2 |
| Hypothetical protein | DXB87_01510 | Not Available | Negative | 319669 - 320124 | 16797.6 |
| hypothetical protein | DXB87_01515 | Not Available | Negative | 320661 - 320870 | 7723.15 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

