Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_01135 | Not Available | Positive | 268976 - 269542 | 21519.5 |
| hypothetical protein | DXB87_01140 | Not Available | Positive | 270300 - 270563 | 10343.2 |
| dna primase | DXB87_01145 | Not Available | Positive | 270541 - 272208 | 64525.2 |
| hypothetical protein | DXB87_01150 | Not Available | Positive | 272210 - 272392 | 7072.34 |
| hypothetical protein | DXB87_01155 | Not Available | Positive | 272395 - 272616 | 8683.45 |
| hypothetical protein | DXB87_01160 | Not Available | Positive | 272622 - 272999 | 14675.8 |
| hypothetical protein | DXB87_01165 | Not Available | Positive | 272996 - 273403 | 15815.6 |
| hypothetical protein | DXB87_01170 | Not Available | Positive | 273387 - 274175 | 29780.7 |
| hypothetical protein | DXB87_01175 | Not Available | Positive | 274205 - 274459 | 9649.9 |
| phage portal protein | DXB87_01180 | Not Available | Negative | 274656 - 276152 | 57727.8 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

