Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_09860 | Not Available | Positive | 2219883 - 2221658 | 66546.7 |
| hypothetical protein | DXB87_09865 | Not Available | Positive | 2221651 - 2222589 | 35030.3 |
| hypothetical protein | DXB87_09870 | Not Available | Positive | 2222638 - 2223981 | 48350.6 |
| hypothetical protein | DXB87_09875 | Not Available | Positive | 2224294 - 2228646 | 157809.0 |
| hypothetical protein | DXB87_09880 | Not Available | Positive | 2228661 - 2229875 | 44821.8 |
| hypothetical protein | DXB87_09885 | Not Available | Positive | 2229937 - 2231373 | 53227.5 |
| butyrate kinase | DXB87_09895 | Not Available | Negative | 2232521 - 2233612 | 39649.6 |
| phosphate butyryltransferase | DXB87_09900 | Not Available | Negative | 2233624 - 2234544 | 33457.7 |
| hypothetical protein | DXB87_09905 | Not Available | Positive | 2234745 - 2236358 | 61087.5 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DXB87_09910 | Not Available | Positive | 2236541 - 2238310 | 65982.2 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

