Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asnc family transcriptional regulator | DXB87_09795 | Not Available | Positive | 2201343 - 2201813 | 17449.3 |
| duf4491 family protein | DXB87_09800 | Not Available | Positive | 2201813 - 2202130 | 12355.3 |
| duf4968 domain-containing protein | DXB87_09805 | Not Available | Negative | 2202240 - 2204726 | 95166.6 |
| glycoside hydrolase family 97 protein | DXB87_09810 | Not Available | Negative | 2204897 - 2207053 | 81860.6 |
| cycloisomaltooligosaccharide glucanotransferase | DXB87_09815 | Not Available | Negative | 2207068 - 2208867 | 67844.9 |
| susf/suse family outer membrane protein | DXB87_09820 | Not Available | Negative | 2208888 - 2210405 | 56668.3 |
| tonb-dependent receptor | DXB87_09830 | Not Available | Negative | 2211995 - 2215024 | 111195.0 |
| hypothetical protein | DXB87_09835 | Not Available | Negative | 2215239 - 2216834 | 62263.2 |
| arac family transcriptional regulator | DXB87_09850 | Not Available | Positive | 2218358 - 2219218 | 33787.1 |
| duf3575 domain-containing protein | DXB87_09855 | Not Available | Positive | 2219329 - 2219871 | 20866.8 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

