Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3843 family protein | DXB87_00680 | Not Available | Positive | 175044 - 176213 | 45275.3 |
| galactokinase | DXB87_00685 | Not Available | Negative | 176287 - 177441 | 42941.9 |
| mfs transporter | DXB87_00690 | Not Available | Negative | 177529 - 178812 | 44429.8 |
| galactose mutarotase | DXB87_00695 | Not Available | Negative | 178862 - 179956 | 40182.1 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DXB87_00700 | Not Available | Negative | 180051 - 181337 | 47814.9 |
| hypothetical protein | DXB87_00705 | Not Available | Negative | 181410 - 182066 | 24227.2 |
| molecular chaperone dnaj | DXB87_00710 | Not Available | Negative | 182340 - 183524 | 42520.6 |
| nucleotide exchange factor grpe | DXB87_00715 | Not Available | Negative | 183540 - 184145 | 22830.8 |
| dna-binding response regulator | DXB87_00725 | Not Available | Positive | 186279 - 187067 | 29711.9 |
| atp-binding cassette domain-containing protein | DXB87_00730 | Not Available | Positive | 187186 - 188805 | 61050.8 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

