Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | DXB87_09420 | Not Available | Positive | 2124501 - 2125328 | 29447.7 |
| hypothetical protein | DXB87_09425 | Not Available | Negative | 2125342 - 2126106 | 28639.0 |
| hypothetical protein | DXB87_09430 | Not Available | Negative | 2126117 - 2127304 | 44674.4 |
| hypothetical protein | DXB87_09435 | Not Available | Negative | 2127632 - 2129740 | 77135.6 |
| hesa/moeb/thif family protein | DXB87_09440 | Not Available | Negative | 2129847 - 2130563 | 26283.7 |
| 2-iminoacetate synthase thih | DXB87_09445 | Not Available | Negative | 2130793 - 2131944 | 43778.3 |
| phosphomethylpyrimidine synthase thic | DXB87_09450 | Not Available | Negative | 2131996 - 2133696 | 63738.9 |
| thiazole synthase | DXB87_09455 | Not Available | Negative | 2133756 - 2134532 | 27700.6 |
| thiamine phosphate synthase | DXB87_09460 | Not Available | Negative | 2134978 - 2135640 | 24436.6 |
| sulfur carrier protein this | DXB87_09465 | Not Available | Negative | 2135630 - 2135830 | 7148.73 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

