Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | DXB87_09360 | Not Available | Positive | 2112210 - 2113766 | 59792.3 |
| mbl fold metallo-hydrolase | DXB87_09365 | Not Available | Positive | 2113791 - 2114672 | 32519.5 |
| carboxypeptidase regulatory-like domain-containing protein | DXB87_09370 | Not Available | Positive | 2114960 - 2116762 | 69297.7 |
| hypothetical protein | DXB87_09375 | Not Available | Positive | 2116795 - 2117367 | 21978.2 |
| hypothetical protein | DXB87_09380 | Not Available | Positive | 2117382 - 2117852 | 17883.7 |
| energy transducer tonb | DXB87_09390 | Not Available | Positive | 2118239 - 2119828 | 60537.4 |
| hypothetical protein | DXB87_09395 | Not Available | Positive | 2119937 - 2120119 | 6823.69 |
| tonb-dependent receptor | DXB87_09400 | Not Available | Negative | 2120164 - 2122269 | 80121.1 |
| helix-turn-helix domain-containing protein | DXB87_09405 | Not Available | Negative | 2122361 - 2123365 | 37899.5 |
| arac family transcriptional regulator | DXB87_09410 | Not Available | Negative | 2123334 - 2124242 | 35228.1 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

