Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Gallus gallus, Bos |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain OM06-2 OM06-2.Scaf63, whole genome
Gene Summary
Adenine Count
1073471 bp
Thymine Count
1083807 bp
Guanine Count
870519 bp
Cytosine Count
860999 bp
Genome Length
3889096 bp
Protein-coding Genes
3270 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXB87_00625 | Not Available | Positive | 160118 - 160492 | 14271.2 |
| hypothetical protein | DXB87_00630 | Not Available | Positive | 160498 - 161769 | 47196.7 |
| divalent metal cation transporter | DXB87_00635 | Not Available | Positive | 161847 - 163109 | 46093.1 |
| had family hydrolase | DXB87_00645 | Not Available | Positive | 164325 - 164972 | 24431.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DXB87_00650 | Not Available | Positive | 165037 - 165858 | 29546.1 |
| mfs transporter | DXB87_00655 | Not Available | Positive | 165966 - 167087 | 41818.9 |
| energy-dependent translational throttle protein etta | DXB87_00660 | Not Available | Positive | 167107 - 168795 | 63979.5 |
| alkaline phosphatase family protein | DXB87_00665 | Not Available | Negative | 168967 - 170154 | 45529.6 |
| tonb-dependent receptor | DXB87_00670 | Not Available | Negative | 170240 - 173431 | 118365.0 |
| mfs transporter | DXB87_00675 | Not Available | Positive | 173851 - 175026 | 42615.5 |
Pathways
165 pathways
Health Effects
No health effects information available for this bacterium.

